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BIOSAMPLE INFORMATION | |||||
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GOLD Biosample ID
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Gb0119280 |
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Biosample Name
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Rumen-fistulated moose microbial communities from Alaska, USA - LMS_cellobiose_enrichment |
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Other Names
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Habitat
(MIGS-6)
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Rumen-fistulated moose |
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Community
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microbial communities |
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Location
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Ohio, USA |
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Identifier
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LMS_cellobiose_enrichment |
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NCBI Taxonomy ID
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NCBI Taxonomy Name
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stomach metagenome |
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Add Date
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2015-08-15 |
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Biosample Description
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LMS cellobiose enrichment; Rumen fluid biosample from rumen-fistulated moose that consumed three seasonal natural vegetation diets (spring, summer and fall/winter) |
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Biosample Information Visibility
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Public | ||||
ECOSYSTEM CLASSIFICATION
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Ecosystem |
Host-associated |
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Ecosystem Category |
Mammals |
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Ecosystem Type |
Digestive system |
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Ecosystem Subtype |
Stomach |
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Specific Ecosystem |
Rumen fluid |
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Ecosystem Path Id |
6389 |
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BIOSAMPLE COMPOSITION | |||||
Number of Studies |
1 |
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Number of Seq Projects |
1 |
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Number of Analysis Projects |
3 |
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Number of Related Biosamples |
24 |
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BIOSAMPLE ISOLATION | |
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Sample Collection Site
(MIGS-13)
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Rumen fluid from live moose (Rumen-fistulated moose) |
Sample Collection Date
(MIGS-5)
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2014-10-22 |
Sample Collection Publication
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Sample Isolation Comments |
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Size Fraction
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Sample Isolation Country/Ocean |
USA |
Sample Collection Method
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Sample Contact Name
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Daniel Marcus |
Sample Contact Email
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[email protected] |
SIP METADATA | |
Sample Volume (ul) |
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Concentration (ng/ul) |
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Fraction Density (g/ml) |
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Sample Group Name |
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Isotope Label |
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ENVIRONMENTAL INFORMATION | |||||
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Geographic Location
(MIGS-4)
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USA: Matanuska Research Center, Alaska |
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Latitude
(MIGS-4.1)
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61.566367 |
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Longitude
(MIGS-4.2)
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-149.2538247 |
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LatLong Information
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Inferred |
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Geographical Map | |||||
Broad-scale Environmental Context (MIxS:0000012) |
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Local Environmental Context (MIxS:0000013) |
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Environmental Medium (MIxS:0000014) |
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Altitude
(meter)
(MIGS-4.4)
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Elevation |
0 Meters.
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Depth
(MIGS-4.3)
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0 Meters.
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Subsurface Depth |
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Sample Collection Temperature |
25 Celsius.
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Salinity (MIGS-6.3) |
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Pressure |
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pH |
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Chlorophyll Concentration |
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Nitrate Concentration |
below detection |
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Oxygen Concentration |
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Salinity Concentration |
150 mgL |
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Methane Concentration (mmol) |
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Sample Conductivity
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Habitat |
Rumen-fistulated moose |
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Bicarbonate Concentration (mM) |
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Soluble Iron Concentration (uM) |
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Hydrogen Sulfide Concentration (mM) |
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Hydrogen Sulfide Presence |
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Irradiance |
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Oxygen Presence |
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GROWTH CONDITIONS | |||||
Growth Conditions |
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HOST INFORMATION | |
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Isolation Host Name
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Alces alces gigas |
Host Taxonomy ID
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341674 |
Host Gender |
Female |
Host Race |
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Host Age |
12 |
Host Health Condition |
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Health Disease Status
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Patient Visit Number |
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Host Medication |
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Medical Record Number |
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Host Body Site |
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Host Body Subsite |
Rumen |
Host Body Product |
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Host Specificity or Range |
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Host Comments |
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Host Diseases (MIGS-15) |
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