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BIOSAMPLE INFORMATION | |||||
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GOLD Biosample ID
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Gb0099035 |
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Biosample Name
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Atta colombica fungus garden |
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Other Names
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Habitat
(MIGS-6)
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Fungus garden |
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Community
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microbial communities |
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Location
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from leaf-cutting ants in Gamboa, Panama |
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Identifier
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NCBI Taxonomy ID
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NCBI Taxonomy Name
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ant fungus garden metagenome |
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Add Date
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2014-07-15 |
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Biosample Description
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Leaf-Cutter Ant Atta colombica Fungus Garden |
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Biosample Information Visibility
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Public | ||||
ECOSYSTEM CLASSIFICATION
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Ecosystem |
Environmental |
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Ecosystem Category |
Terrestrial |
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Ecosystem Type |
Nest |
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Ecosystem Subtype |
Insects nest |
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Specific Ecosystem |
Fungus garden/Fungus gallery |
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Ecosystem Path Id |
7274 |
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BIOSAMPLE COMPOSITION | |||||
Number of Studies |
1 |
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Number of Seq Projects |
1 |
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Number of Analysis Projects |
1 |
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Number of Related Biosamples |
8 |
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BIOSAMPLE ISOLATION | |
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Sample Collection Site
(MIGS-13)
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Gamboa, Panama |
Sample Collection Date
(MIGS-5)
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5/1/2008 |
Sample Collection Publication
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Sample Isolation Comments |
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Size Fraction
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Sample Isolation Country/Ocean |
Panama |
Sample Collection Method
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Sample Contact Name
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Garret Suen |
Sample Contact Email
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[email protected] |
SIP METADATA | |
Sample Volume (ul) |
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Concentration (ng/ul) |
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Fraction Density (g/ml) |
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Sample Group Name |
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Isotope Label |
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ENVIRONMENTAL INFORMATION | |
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Geographic Location
(MIGS-4)
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Gamboa, Panama |
Latitude
(MIGS-4.1)
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9.117 |
Longitude
(MIGS-4.2)
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-79.7 |
LatLong Information
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Verified |
Geographical Map | |
Broad-scale environmental context (MIxS:0000012) |
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Local environmental context (MIxS:0000013) |
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Environmental medium (MIxS:0000014) |
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Altitude
(meter)
(MIGS-4.4)
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Elevation |
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Depth
(MIGS-4.3)
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0.5 Meters.
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Subsurface Depth |
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Sample Collection Temperature |
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Salinity (MIGS-6.3) |
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Pressure |
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pH |
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Chlorophyll Concentration |
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Nitrate Concentration |
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Oxygen Concentration |
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Salinity Concentration |
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Methane Concentration (mmol) |
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Sample Conductivity
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Habitat |
Fungus garden |
Bicarbonate Concentration (mM) |
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Soluble Iron Concentration (uM) |
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Hydrogen Sulfide Concentration (mM) |
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Hydrogen Sulfide Presence |
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Irradiance |
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Oxygen Presence |
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GROWTH CONDITIONS | |
Growth Conditions |
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