ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0521874
Analysis Project Name Shigella sonnei AR-0422
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. 3
IMG Decontamination
IMG Decontamination Method
Scaffold Count
Contig Count 7
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size 5350000
Sequencing Depth (MIGS-31.1) 107.33x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2021-12-24
Last Modified By
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
Genbank Accession
Genbank ID CP044195 (GCA_008727295.1)
Release Date 2019-09-28
NCBI Genbank Version CP044195.1
Genbank ID CP044194 (GCA_008727295.1)
Release Date 2019-09-28
NCBI Genbank Version CP044194.1
Genbank ID CP044197 (GCA_008727295.1)
Release Date 2019-09-28
NCBI Genbank Version CP044197.1
Genbank ID CP044196 (GCA_008727295.1)
Release Date 2019-09-28
NCBI Genbank Version CP044196.1
Genbank ID CP044192 (GCA_008727295.1)
Release Date 2019-09-28
NCBI Genbank Version CP044192.1
Genbank ID CP044191 (GCA_008727295.1)
Release Date 2019-09-28
NCBI Genbank Version CP044191.1
Genbank ID CP044193 (GCA_008727295.1)
Release Date 2019-09-28
NCBI Genbank Version CP044193.1
Genbank Release Date 2019-09-28
ANALYSIS PROJECT COMPOSITION
Study Enteric Pathogen Diversity Genome sequencing and assembly
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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