ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0520367
Analysis Project Name Shigella flexneri AR-0423
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. 3
IMG Decontamination
IMG Decontamination Method
Scaffold Count
Contig Count 3
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size 4850000
Sequencing Depth (MIGS-31.1) 58.34x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2021-12-24
Last Modified By
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
Genbank Accession
Genbank ID CP044159 (GCA_008727275.1)
Release Date 2019-09-28
NCBI Genbank Version CP044159.1
Genbank ID CP044160 (GCA_008727275.1)
Release Date 2019-09-28
NCBI Genbank Version CP044160.1
Genbank ID CP044158 (GCA_008727275.1)
Release Date 2019-09-28
NCBI Genbank Version CP044158.1
Genbank Release Date 2019-09-28
ANALYSIS PROJECT COMPOSITION
Study Enteric Pathogen Diversity Genome sequencing and assembly
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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