ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0519786
Analysis Project Name Agrobacterium rubi W2/73
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Unicycler v. 0.4.7
IMG Decontamination
IMG Decontamination Method
Scaffold Count
Contig Count 7
Gene Calling Method (MIGS-32)
Gene Count 5202
Estimated Size 5530000
Sequencing Depth (MIGS-31.1) 83x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2021-12-24
Last Modified By
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
Genbank Accession
Genbank ID CP049207 (GCA_017584165.1)
Release Date 2021-04-13
NCBI Genbank Version CP049207.1
Genbank ID CP049206 (GCA_017584165.1)
Release Date 2021-04-13
NCBI Genbank Version CP049206.1
Genbank ID CP049211 (GCA_017584165.1)
Release Date 2021-04-13
NCBI Genbank Version CP049211.1
Genbank ID CP049209 (GCA_017584165.1)
Release Date 2021-04-13
NCBI Genbank Version CP049209.1
Genbank ID CP049208 (GCA_017584165.1)
Release Date 2021-04-13
NCBI Genbank Version CP049208.1
Genbank ID CP049210 (GCA_017584165.1)
Release Date 2021-04-13
NCBI Genbank Version CP049210.1
Genbank ID CP049212 (GCA_017584165.1)
Release Date 2021-04-13
NCBI Genbank Version CP049212.1
Genbank Release Date 2021-04-13
ANALYSIS PROJECT COMPOSITION
Study Agrobacterium tumefaciens and Agrobacterium rhizogenes strains sequenced as part of a study on Ti plasmid evolution and epidemiology
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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