ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0507229
Analysis Project Name Metatranscriptome of microalgae culture inoculated with mixed bacterial community from LLNL, Livermore, California, USA - f20_d5_A_S30 (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of microalgae culture inoculated with mixed bacterial community from LLNL, Livermore, California, USA - f20_d5_A_S30
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 264362
Completion Status Complete
IMG Completion Date 2022-03-20
PI Xavier Mayali
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2022-01-21 11:21:48 - MEGAHIT v1.2.9
Scaffold Count 40546
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 69856
Estimated Size 45866079
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.5
Added By JGI automated process on 2021-11-13
Last Modified By JGI automated process on 2022-03-21
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300050694
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Phycosphere-associated microbial communities from algal ponds
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1335136 (Portal)
ITS Analysis Project Name f20_d5_A_S30 metatranscriptome Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60001054

 

 

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