ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0506604 |
Analysis Project Name |
Metatranscriptome of adjacent soil microbial communities from hotspring runoff channel in Yellowstone National Park, Wyoming, USA - Soil_T4_3 (Eukaryote Community Metatranscriptome) |
Analysis Project Name Stem |
Metatranscriptome of adjacent soil microbial communities from hotspring runoff channel in Yellowstone National Park, Wyoming, USA - Soil_T4_3 |
Analysis Project Name Suffix
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Analysis Project Type
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Metatranscriptome Analysis |
IMG Submission ID
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261747 |
Completion Status |
Complete |
IMG Completion Date
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2022-02-19 |
PI | Debashish Bhattacharya |
Analysis Project Description
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|
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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megahit v. 2022-01-25 13:11:24 - MEGAHIT v1.2.9 |
Scaffold Count
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345836 |
Contig Count
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|
Gene Calling Method
(MIGS-32)
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|
Gene Count |
439233 |
Estimated Size |
268605303 |
Sequencing Depth
(MIGS-31.1)
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Genbank Anomalous Assembly |
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Genbank Anomalous Reason |
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Annotation Pipeline |
IMG Annotation Pipeline v.5.1.3 |
Added By |
JGI automated process
on 2021-11-05 |
Last Modified By |
JGI automated process
on 2022-04-22 |
ORF Comparison Tools
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300050370 |
IMG RNA-Seq ID |
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Genbank Accession
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Genbank Release Date |
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SRA Runs |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Adjacent soil, biofilm, and endolithic microbial communities from hotspring runoff channel in Yellowstone National Park, Wyoming, USA |
Number of Studies
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1 |
Number of Biosamples
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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2 |
JGI INFORMATION | |
JGI Data Utilization Status
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Unrestricted |
ITS Analysis Project ID
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1337427 (Portal) |
ITS Analysis Project Name
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Soil MT_T4_3 |
ITS Analysis Product Name
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Eukaryote Community Metatranscriptome |
ITS Version Number |
1 |
JGI Award DOI
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10.46936/10.25585/60000481 |
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