Studies
|
54,052 |
|
Biosamples
|
174,371 |
|
Sequencing Projects
|
485,189 |
|
Analysis Projects
|
368,755 |
| Organisms | 468,052 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0506604 |
| Analysis Project Name |
Metatranscriptome of adjacent soil microbial communities from hotspring runoff channel in Yellowstone National Park, Wyoming, USA - Soil_T4_3 (Eukaryote Community Metatranscriptome) |
| Analysis Project Name Stem |
Metatranscriptome of adjacent soil microbial communities from hotspring runoff channel in Yellowstone National Park, Wyoming, USA - Soil_T4_3 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metatranscriptome Analysis |
|
IMG Submission ID
|
261747 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2022-02-19 |
| PI | Debashish Bhattacharya |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
megahit v. 2022-01-25 13:11:24 - MEGAHIT v1.2.9 |
|
Scaffold Count
|
345836 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
439233 |
| Estimated Size |
268605303 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.1.3 |
| Added By |
JGI automated process
on 2021-11-05 |
| Last Modified By |
JGI automated process
on 2022-04-22 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300050370 |
| IMG RNA-Seq ID |
|
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Adjacent soil, biofilm, and endolithic microbial communities from hotspring runoff channel in Yellowstone National Park, Wyoming, USA |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
2 |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Unrestricted |
|
ITS Analysis Project ID
|
1337427 (Portal) |
|
ITS Analysis Project Name
|
Soil MT_T4_3 |
|
ITS Analysis Product Name
|
Eukaryote Community Metatranscriptome |
| ITS Version Number |
1 |
|
JGI Award DOI
|
10.46936/10.25585/60000481 |
You are going to add the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the AP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Changing the AP visibility will also change downgrade visibility on the following items:
Do you want to continue with this visibility change?
