Studies
|
56,334 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0505201 |
| Analysis Project Name |
Lachnospiraceae bacterium PH1-22 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Genome Analysis (Isolate) |
|
IMG Submission ID
|
260681 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2022-02-15 |
| PI | Zakee L. Sabree |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
spades v. spades/3.15.3 |
|
IMG Decontamination
|
|
|
IMG Decontamination Method
|
|
|
Scaffold Count
|
48 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
3009 |
| Estimated Size |
3086236 |
|
Sequencing Depth
(MIGS-31.1)
|
274x |
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.1.1 |
| Added By | JGI automated process on 2021-10-23 |
| Last Modified By | JGI automated process on 2022-05-25 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
2940295490 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Genome Encyclopedia of Bacteria and Archaea VI: Functional Genomics of Type Strains |
|
Number of Studies
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
0 |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Unrestricted |
|
ITS Analysis Project ID
|
1335508 (Portal) |
|
ITS Analysis Project Name
|
Lachnospiraceae sp. PH1-22 |
|
ITS Analysis Product Name
|
Microbial Minimal Draft Isolate Genome |
| ITS Version Number |
1 |
|
Library Names
|
HUUXY |
|
JGI Award DOI
|
10.46936/10.25585/60001193 |
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