ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0502818
Analysis Project Name Prefix Metatranscriptome of woodchip biofilm microbial communities from lab scale WBRs in New York, USA - hf_cs_p2_t10_h100_prok
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 259309
Completion Status Complete
IMG Completion Date 2021-12-13
PI Matthew Reid
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2021-12-04 07:04:25 - MEGAHIT v1.2.9
Scaffold Count 352704
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 463566
Estimated Size 210975677
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.25
Added By JGI automated process on 2021-09-25
Last Modified By JGI automated process on 2021-12-13
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300049804
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Woodchip biofilm microbial communities from lab scale and field WBRs in New York, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1336809 (Portal)
ITS Analysis Project Name hf_cs_p2_t10_h100_prok Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1

 

 

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