ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0500728 |
Analysis Project Name |
GRE coassembly MetaHipMer |
Analysis Project Name Suffix
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Analysis Project Type
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Combined Assembly |
IMG Submission ID
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255440 |
Completion Status |
Complete |
IMG Completion Date
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2021-09-03 |
PI | Jennifer Pett-Ridge |
Analysis Project Description
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Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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MetaHipmer2 v. 2.0.1.v2.0.0-110-gb87d7c1-Issue69 |
IMG Decontamination
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IMG Decontamination Method
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Scaffold Count
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55342847 |
Contig Count
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Gene Calling Method
(MIGS-32)
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Gene Count |
112151078 |
Estimated Size |
74970251022 |
Sequencing Depth
(MIGS-31.1)
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Genbank Anomalous Assembly |
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Genbank Anomalous Reason |
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Annotation Pipeline |
IMG Annotation Pipeline v.5.0.24 |
Added By | JGI automated process on 2021-08-24 |
Last Modified By | JGI automated process on 2022-05-25 |
ORF Comparison Tools
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300047160 |
Genbank Accession
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Genbank Release Date |
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SRA Runs |
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Genome Publication |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico |
Number of Studies
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1 |
Number of Biosamples
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95 |
Number of Projects
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95 |
Number of Related Analysis Projects
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96 |
Derived Analysis Projects (DAP)
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0 |
JGI INFORMATION | |
JGI Data Utilization Status
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Restricted |
ITS Analysis Project ID
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1336702 (Portal) |
ITS Analysis Project Name
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GRE coassembly MetaHipMer |
ITS Analysis Product Name
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Combined Assembly |
ITS Version Number |
1 |
Library Names
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CXZNB, CXZNC, CXZNG, CXZNH, CXZNN, CXZNO, CXZNP, CXZNS, CXZNT, CYONP, CYONS, CYONT, CYONU, CYONW, CYONX, CYONY, CYONZ, CYOOA, CYOOB, CYOOC, CYOOG, CYOOH, CYOON, CYOOO, CYUHW, CYUHX, CYUHY, CYUHZ, CYUNA, CYUNB, CYUNC, CYUNG, CYUNH, CYUNN, CYUNO, CYUNP, CYUNS, CYUNT, CYUNU, CYUNW, CZGOA, CZGOB, CZGOC, CZGOG, CZGOH, CZGON, CZGOO, CZGOP, CZGUA, CZGUB, CZGUC, CZGUG, CZGUH, CZGUN, CZGUO, CZGUP, CZGUS, CZGUT, CZGUU, CZGUW, CZGUX, CZGUY, CZGUZ, CZGWA, CZOHZ, CZONA, CZONB, CZONG, CZONH, CZONN, CZONO, GAAGG, GAAGH, GAAGN, GAAGO, GAAGP, GAAGS, GAAGT, GAAGU, GAAGW, GAAGX, GAAGY, GAAGZ, GAAHA, GAAHB, GAAHC, GAAHG, GAAHH, GAAHN, GAAHO, GAAHP, GAAHS, GAAHT, GAAHU |
JGI Award DOI
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