ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0498908
Analysis Project Name Prefix Metatranscriptome of sediment microbial communities from freshwater Prado Wetlands in Corona, California, USA - CSM_Prado_Oct18_PM_2.5z2
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI Jonathan Sharp
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By JGI automated process on 2021-07-24
Last Modified By JGI automated process on 2021-07-24
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sediment microbial communities from freshwater and brackish wetlands in California and Colorado, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
ITS Analysis Project ID 1323544 (Portal)
ITS Analysis Project Name CSM_Prado_Oct18_PM_2.5z2_RNA_polyA Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1

 

 

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