ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0485835 |
Analysis Project Name |
Microbial mat bacterial communities from riparian zone, North Slope, Alaska, United States - OKS_BSeep2A_28June2019 |
Analysis Project Name Suffix
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|
Analysis Project Type
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Metagenome Analysis |
IMG Submission ID
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253417 |
Completion Status |
Complete |
IMG Completion Date
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2021-06-05 |
PI | David Emerson |
Analysis Project Description
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|
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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metaspades v. 3.14.1 |
Scaffold Count
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262115 |
Contig Count
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|
Gene Calling Method
(MIGS-32)
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|
Gene Count |
405490 |
Estimated Size |
230811065 |
Sequencing Depth
(MIGS-31.1)
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|
Genbank Anomalous Assembly |
|
Genbank Anomalous Reason |
|
Annotation Pipeline |
IMG Annotation Pipeline v.5.0.23 |
Added By | JGI automated process on 2021-03-04 |
Last Modified By | JGI automated process on 2022-05-25 |
ORF Comparison Tools
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|
PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300045855 |
IMG Metagenome bin count |
2 |
IMG Predicted viruses |
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Genbank Accession
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Genbank Release Date |
|
SRA Runs |
|
ANALYSIS PROJECT COMPOSITION | |
Study |
Sediment chemolithoautotrophic microbial communities from various locations |
Number of Studies
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1 |
Number of Biosamples
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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0 |
Derived Analysis Projects (DAP)
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0 |
JGI INFORMATION | |
JGI Data Utilization Status
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Unrestricted |
ITS Analysis Project ID
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1294669 (Portal) |
ITS Analysis Project Name
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OKS_BSeep2A_28June2019_MG |
ITS Analysis Product Name
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Metagenome Standard Draft |
ITS Version Number |
1 |
Library Names
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HHNPW |
JGI Award DOI
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10.46936/10.25585/60001141 |
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