ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0478457
Analysis Project Name Variovorax sp. UMC13
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 247543
Completion Status Complete
IMG Completion Date 2021-01-23
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. MAY-2016; Edena v. MAY-2016;a5-miseq v. MAY-2016
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 43
Contig Count 43
Gene Calling Method (MIGS-32)
Gene Count 6908
Estimated Size 7144849
Sequencing Depth (MIGS-31.1) 150.0x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.20
Added By JGI automated process on 2020-12-21
Last Modified By JGI automated process on 2021-02-03
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2916137223
Genbank Accession
Genbank ID LZZW00000000 (GCA_014170375.1)
Release Date 2020-08-13
NCBI Genbank Version LZZW01
Genbank Release Date 2020-08-13
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Terpene-metabolizing soil isolates
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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