ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0466974
Analysis Project Name Prefix Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3E1
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 251097
Completion Status Complete
IMG Completion Date 2021-04-08
PI Richard Dick
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.14.1
Scaffold Count 691251
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1302843
Estimated Size 867996824
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2020-12-05
Last Modified By JGI automated process on 2021-04-28
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300044660
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Rhizosphere and soil microbial communities from millet plants in semiarid region near Thies, Senegal
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1290241 (Portal)
ITS Analysis Project Name OSS metagenome CSC3E1
ITS Analysis Product Name Metagenome Standard Draft
ITS Version Number 1

 

 

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