ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0453412
Analysis Project Name Prefix Metatranscriptome of plant tissue microbial communities from Arabidopsis thaliana in University of Tennessee, Knoxville, TN, United States - Col0_38E_2
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome mapping (self)
IMG Submission ID 246373
Completion Status Incomplete
IMG Completion Date
PI Sarah Lebeis
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By JGI automated process on 2020-08-28
Last Modified By JGI automated process on 2020-12-24
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID 10221
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Aquatic microbiome from duckweeds obtained from Rutgers Duckweed Stock Cooperative (RDSC)
Number of Projects 1
Reference Analysis Project Metatranscriptome of plant tissue microbial communities from Arabidopsis thaliana in University of Tennessee, Knoxville, TN, United States - Col0_38E_2 (Metagenome Metatranscriptome)
JGI INFORMATION
ITS Analysis Project ID 1279034 (Portal)
ITS Analysis Project Name Col0_38E_2 Expression - Self
ITS Analysis Product Name Metagenome Metatranscriptome Expression - Self
ITS Version Number 1

 

 

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