ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0452841
Analysis Project Name Prefix Helcococcus ovis KG-40
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 239629
Completion Status Complete
IMG Completion Date 2020-09-21
PI
PI Name
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.11.1
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 140
Contig Count 140
Gene Calling Method (MIGS-32)
Gene Count 1801
Estimated Size 1776372
Sequencing Depth (MIGS-31.1) 143x
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By JGI automated process on 2020-08-25
Last Modified By JGI automated process on 2020-10-13
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2889533087
Genbank Accession
Genbank ID SCFP00000000 (GCA_004524815.1)
Release Date 2020-04-06
NCBI Genbank Version SCFP01
Assembly Accession GCA_004524815.1
Genbank Release Date 2020-04-06
ANALYSIS PROJECT COMPOSITION
Study Emerging uterine pathogen associated with metritis and fever in dairy cows.
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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