ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0446284
Analysis Project Name Prefix Pantoea sp. VH_24
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 249880
Completion Status Complete
IMG Completion Date 2021-03-01
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.10.1
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 49
Contig Count 49
Gene Calling Method (MIGS-32)
Gene Count 4855
Estimated Size 4869507
Sequencing Depth (MIGS-31.1) 194.770375x
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2020-07-14
Last Modified By JGI automated process on 2021-03-10
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2924464632
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID VWUC00000000 (GCA_008631345.1)
Release Date 2019-09-24
NCBI Genbank Version VWUC01
Genbank Release Date 2019-09-24
ANALYSIS PROJECT COMPOSITION
Study Genomic diversity of phyloplane-associated Pantoea species in Pakistan cotton crop
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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