ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0446188
Analysis Project Name Prefix Shewanella sp. LC2
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 242490
Completion Status Complete
IMG Completion Date 2020-11-01
PI
PI Name
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.11
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 147
Contig Count 147
Gene Calling Method (MIGS-32)
Gene Count 5262
Estimated Size 5355693
Sequencing Depth (MIGS-31.1) 450x
Annotation Pipeline IMG Annotation Pipeline v.5.0.20
Added By JGI automated process on 2020-07-14
Last Modified By JGI automated process on 2020-11-10
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2900441308
Genbank Accession
Genbank ID VFSJ00000000 (GCA_006385775.1)
Release Date 2019-06-28
NCBI Genbank Version VFSJ01
Assembly Accession GCA_006385775.1
Genbank Release Date 2019-06-28
ANALYSIS PROJECT COMPOSITION
Study Shewanella sp. Genome sequencing and assembly
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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