ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0442626
Analysis Project Name Prefix Pasteurella caecimuris NM44_TS2-9
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 243157
Completion Status Complete
IMG Completion Date 2020-11-16
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Spades v. 3.10.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 53
Contig Count 53
Gene Calling Method (MIGS-32)
Gene Count 2622
Estimated Size 2582460
Sequencing Depth (MIGS-31.1) 1000x
Annotation Pipeline IMG Annotation Pipeline v.5.0.20
Added By JGI automated process on 2020-07-07
Last Modified By JGI automated process on 2020-12-01
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2902511754
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID SRYN00000000 (GCA_004793515.1)
Release Date 2020-04-15
NCBI Genbank Version SRYN01
Genbank Release Date 2020-04-15
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing and assembly - library of cultured bacterial species from laboratory mouse gut microbiota from the University of Toronto
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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