ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0438081
Analysis Project Name Sorted cell/s from peatland in MTU Mesocosm Facility, Houghton, MI, USA - JGI_Llskov.PC30cm.SYBR.1.I12
Analysis Project Name Suffix
Analysis Project Type Metagenome - Single Particle Sort
IMG Submission ID 239526
Completion Status Complete
IMG Completion Date 2020-09-16
PI Erik Lilleskov
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.14.1
Scaffold Count 88
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 763
Estimated Size 732406
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By JGI automated process on 2020-03-18
Last Modified By JGI automated process on 2022-06-18
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300041653
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1277693 (Portal)
ITS Analysis Project Name Uncultured microbe JGI_Llskov.PC30cm.SYBR.1.I12
ITS Analysis Product Name Single Particle Sort, 16S Negative, Unscreened
ITS Version Number 1
Library Names GXBWC
JGI Award DOI