ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0437697
Analysis Project Name Enriched cells from mangrove seawater in Basse-Terre, Guadeloupe - Cand. Thiomargarita magnifica 71
Analysis Project Name Suffix
Analysis Project Type Metagenome - Cell Enrichment
IMG Submission ID 240772
Completion Status Complete
IMG Completion Date 2020-09-26
PI Tanja Woyke
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.14.1
Scaffold Count 1494
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 12363
Estimated Size 12800214
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By JGI automated process on 2020-03-18
Last Modified By JGI automated process on 2021-12-12
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300041879
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Studying microbial cell-cell associations in a wide range of aquatic ecosystems
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 2
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1275191 (Portal)
ITS Analysis Project Name Cand. Thiomargarita magnifica - filament genomics- 71
ITS Analysis Product Name Amplified, Targeted, Cell Enrichment
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60001074

 

 

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