ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0437037
Analysis Project Name Prefix Rothia sp. HMSC061D12
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 230570
Completion Status Complete
IMG Completion Date 2020-04-06
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 1.1.06
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 13
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1885
Estimated Size 2336535
Sequencing Depth (MIGS-31.1) 171x
Annotation Pipeline IMG Annotation Pipeline v.5.0.14
Added By JGI automated process on 2020-03-14
Last Modified By JGI automated process on 2020-04-15
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2865633782
Genbank Accession
Genbank ID LTQJ00000000 (GCA_001836735.1)
Release Date 2019-07-07
NCBI Genbank Version LTQJ01
Genbank Release Date 2019-07-07
ANALYSIS PROJECT COMPOSITION
Study Human Microbiome Project (HMP) Reference Genomes
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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