ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0411637
Analysis Project Name Prefix Metatranscriptome of enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Bagasse, Gen9, Rep 1, Penicillin and Streptomycin
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 226781
Completion Status Complete
IMG Completion Date 2020-02-28
PI Michelle O'Malley
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. MEGAHIT v1.1.2
Scaffold Count 32176
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 34644
Estimated Size 36988230
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.11
Added By JGI automated process on 2019-10-08
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300037678
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Determining the genomic basis for interactions between gut fungi and methanogenic archaea
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1261921 (Portal)
ITS Analysis Project Name Goat fecal pellet Enrichment Culture - Bagasse, Gen9, Rep 1- treated with Penicillin and Streptomycin(v2)
ITS Analysis Product Name Eukaryote Community Metatranscriptome
ITS Version Number 2

 

 

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