ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0411631
Analysis Project Name Metatranscriptome of enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Bagasse, Gen2, Rep 1, Chloramphenicol (Eukaryote Community Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Bagasse, Gen2, Rep 1, Chloramphenicol
Analysis Project Name Suffix (v2)
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 226775
Completion Status Complete
IMG Completion Date 2020-03-17
PI Michelle O'Malley
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 1.1.2
Scaffold Count 33584
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 34631
Estimated Size 39794029
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.11
Added By JGI automated process on 2019-10-08
Last Modified By Supratim Mukherjee on 2023-02-11
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300037879
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Determining the genomic basis for interactions between gut fungi and methanogenic archaea
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1261909 (Portal)
ITS Analysis Project Name Goat fecal pellet Enrichment Culture - Bagasse, Gen2, Rep 1, treated with Chloramphenicol(v2)
ITS Analysis Product Name Eukaryote Community Metatranscriptome
ITS Version Number 2
Library Names GPZCX
JGI Award DOI