ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0401332
Analysis Project Name Metatranscriptome of marine sediment microbial communities from Baltic Sea, Sweden - F19MarL (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of marine sediment microbial communities from Baltic Sea, Sweden - F19MarL
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 227907
Completion Status Complete
IMG Completion Date 2020-03-03
PI Samuel Hylander
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. MEGAHIT v1.1.2
Scaffold Count 124125
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 128938
Estimated Size 62262906
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.12
Added By JGI automated process on 2019-09-19
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300037769
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Marin sediment microbial communities from Baltic Sea, Sweden
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1250076 (Portal)
ITS Analysis Project Name F19MarL metaT Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60001175

 

 

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