ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0393258
Analysis Project Name Metatranscriptome of enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Xylan, Gen9, Rep 3 (Eukaryote Community Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of enriched fungal communities from goat fecal pellet, Isla Vista, California, United States - Xylan, Gen9, Rep 3
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 222152
Completion Status Complete
IMG Completion Date 2019-11-18
PI Michelle O'Malley
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 1.1.2
Scaffold Count 5847
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 11735
Estimated Size 8152610
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-06-09
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300036108
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Determining the genomic basis for interactions between gut fungi and methanogenic archaea
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1242732 (Portal)
ITS Analysis Project Name Goat fecal pellet Enrichment Culture - Xylan, Gen9, Rep 3
ITS Analysis Product Name Eukaryote Community Metatranscriptome
ITS Version Number 1
Library Names GPYAX
JGI Award DOI