ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0373313
Analysis Project Name Prefix Sphingomonas yabuuchiae DSM 14562
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 212814
Completion Status Complete
IMG Completion Date 2019-06-24
PI Markus Göker
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 58
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4022
Estimated Size 4192364
Sequencing Depth (MIGS-31.1) 358x
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-03-04
Last Modified By JGI automated process on 2020-12-05
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2828620820
Genbank Accession
Genbank ID JACHNX000000000
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the most valuable type-strain genomes for metagenomic binning, comparative biology and taxonomic classification
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1227395 (Portal)
ITS Analysis Project Name Sphingomonas yabuuchiae DSM 14562
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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