ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0371364
Analysis Project Name Prefix Infant fecal microbial communities from premature female in Chicago, USA - carrol
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Description Assembly and annotation of public SRA data set.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Custom JGI assembly, Nielsen et. al.
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By JGI automated process on 2019-02-10
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
 
SRA Run Id SRR492190  (Link to NCBI )
 
SRA Run Id SRR492191  (Link to NCBI )
 
SRA Run Id SRR492066  (Link to NCBI )
 
SRA Run Id SRR492187  (Link to NCBI )
 
SRA Run Id SRR492188  (Link to NCBI )
 
SRA Run Id SRR492185  (Link to NCBI )
 
SRA Run Id SRR492196  (Link to NCBI )
 
SRA Run Id SRR492197  (Link to NCBI )
 
SRA Run Id SRR492065  (Link to NCBI )
 
SRA Run Id SRR492186  (Link to NCBI )
 
SRA Run Id SRR492194  (Link to NCBI )
 
SRA Run Id SRR492183  (Link to NCBI )
 
SRA Run Id SRR492184  (Link to NCBI )
 
SRA Run Id SRR492195  (Link to NCBI )
 
SRA Run Id SRR492192  (Link to NCBI )
 
SRA Run Id SRR492193  (Link to NCBI )
 
SRA Run Id SRR492182  (Link to NCBI )
 
SRA Run Id SRR492189  (Link to NCBI )
ANALYSIS PROJECT COMPOSITION
Study Infant fecal microbial communities from premature female in Chicago, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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