ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0370545
Analysis Project Name Metatranscriptome of bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 211222
Completion Status Complete
IMG Completion Date 2019-12-02
PI Eoin Brodie
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 1.1.2
Scaffold Count 502840
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 609227
Estimated Size 261866582
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.1
Added By JGI automated process on 2019-02-07
Last Modified By JGI automated process on 2022-06-18
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300034643
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1238152 (Portal)
ITS Analysis Project Name ER_RNA_120 Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1
JGI Award DOI 10.46936/fics.proj.2017.49991/60006232

 

 

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