ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0365390
Analysis Project Name Prefix Pseudomonas sp. TN43
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 210974
Completion Status Complete
IMG Completion Date 2019-05-29
PI Sarah Lebeis
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 30
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5578
Estimated Size 6046470
Sequencing Depth (MIGS-31.1) 248x
Annotation Pipeline IMG Annotation Pipeline v.5.0.1
Added By JGI automated process on 2019-01-18
Last Modified By JGI automated process on 2019-08-28
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2824522127
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Characterizing functional chemotaxis receptors in different root zones
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1232633 (Portal)
ITS Analysis Project Name Pseudomonas sp. TN43
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number

 

 

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