ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0365389
Analysis Project Name Prefix Herbaspirillum sp. Sphag1AN
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 210973
Completion Status Complete
IMG Completion Date 2019-05-29
PI Sarah Lebeis
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 41
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4295
Estimated Size 4573585
Sequencing Depth (MIGS-31.1) 328x
Annotation Pipeline IMG Annotation Pipeline v.5.0.1
Added By JGI automated process on 2019-01-18
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2824517831
Genbank Accession
Genbank ID JACHYF000000000
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Characterizing functional chemotaxis receptors in different root zones
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1232631 (Portal)
ITS Analysis Project Name Herbaspirillum sp. Sphag1AN
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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