ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0339353
Analysis Project Name Prefix Porphyromonas gingivalis WW3039
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 228194
Completion Status Complete
IMG Completion Date 2020-02-15
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.6.2
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 132
Contig Count 132
Gene Calling Method (MIGS-32)
Gene Count 2166
Estimated Size 2334097
Sequencing Depth (MIGS-31.1) 32x
Annotation Pipeline IMG Annotation Pipeline v.5.0.11
Added By JGI automated process on 2019-01-01
Last Modified By JGI automated process on 2020-02-28
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2858654178
Genbank Accession
Genbank ID NSLN00000000 (GCA_002529145.1)
Release Date 2017-10-16
NCBI Genbank Version NSLN01
Genbank Release Date 2017-10-16
ANALYSIS PROJECT COMPOSITION
Study Phase variable restriction modification systems in the genome sequences of periodontal pathogens Prevotella intermedia, Tannerella forsythia and Porphyromonas gingivalis
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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