ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0338058
Analysis Project Name Prefix Histophilus somni 3758HS
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 220668
Completion Status Complete
IMG Completion Date 2019-09-18
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 60
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2239
Estimated Size 2269197
Sequencing Depth (MIGS-31.1) 130.58x
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2018-12-28
Last Modified By JGI automated process on 2019-09-30
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2837397511
Genbank Accession
Genbank ID LQGH00000000 (GCA_001931045.1)
Release Date 2017-04-06
NCBI Genbank Version LQGH01
Genbank Release Date 2017-04-06
ANALYSIS PROJECT COMPOSITION
Study Bovine respiratory disease (BRD) relevant bacteria
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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