ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0336979
Analysis Project Name Prefix Snodgrassella alvi N-S3
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 227106
Completion Status Complete
IMG Completion Date 2020-01-27
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.0
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 79
Contig Count 79
Gene Calling Method (MIGS-32)
Gene Count 2289
Estimated Size 2463518
Sequencing Depth (MIGS-31.1) 27.0x
Annotation Pipeline IMG Annotation Pipeline v.5.0.10
Added By JGI automated process on 2018-12-25
Last Modified By JGI automated process on 2020-02-06
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2854086477
IMG RNA-Seq ID
Genbank Accession
Genbank ID NAHN00000000 (GCA_002088635.1)
Release Date 2017-04-17
NCBI Genbank Version NAHN01
Assembly Accession GCA_002088635.1
Genbank Release Date 2017-04-17
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Snodgrassella alvi Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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