ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0326536
Analysis Project Name Prefix Dokdonella fugitiva RH1CCR139
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 209113
Completion Status Complete
IMG Completion Date 2019-03-18
PI Sofie Thijs
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
Scaffold Count 36
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3689
Estimated Size 4240186
Sequencing Depth (MIGS-31.1) 353x
Annotation Pipeline IMG Annotation Pipeline v.5.0.0
Added By JGI automated process on 2018-11-20
Last Modified By JGI automated process on 2021-03-13
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2821084355
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID JACGXM000000000
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase IV (KMG-V): Genome sequencing to study the core and pangenomes of soil and plant-associated prokaryotes
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1224104 (Portal)
ITS Analysis Project Name Dokdonella fugitiva RH1CCR139
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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