ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0325780
Analysis Project Name Prefix Sorted cell/s from fresh water in Lake Michigan, Michigan, United States - Uncultured microbe JGI_GLakes.MI41M.SYBR.02.M16
Analysis Project Name Suffix
Analysis Project Type Metagenome - Single Particle Sort
IMG Submission ID 207383
Completion Status Complete
Completion Date 2019-02-05
PI Maureen Coleman
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 43
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 384
Estimated Size 318947
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.6
Added By JGI automated process on 2018-11-08
Last Modified By JGI automated process on 2019-02-05
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300033248
IMG RNA-Seq ID
Genbank
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater microbial and viral communities from the Laurentian Great Lakes in the United States and Canada
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1230859 (Portal)
ITS Analysis Project Name Uncultured microbe JGI_GLakes.MI41M.SYBR.02.M16
ITS Analysis Product Name Single Particle Sort, 16S Negative, Unscreened
ITS NCBI Taxon ID
ITS Version Number

 

 

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