ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0325396
Analysis Project Name Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day14_3 (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day14_3
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 205712
Completion Status Complete
IMG Completion Date 2019-01-10
PI Steven W. Singer
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 1.1.2
Scaffold Count 34688
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 58619
Estimated Size 35457538
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.6
Added By JGI automated process on 2018-11-08
Last Modified By JGI automated process on 2022-06-18
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300032428
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 5
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1224834 (Portal)
ITS Analysis Project Name SM_Day14_3 metatranscriptome Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60000909

 

 

  You are going to add the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the AP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Changing the AP visibility will also change downgrade visibility on the following items:

 

Do you want to continue with this visibility change?