ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0316998
Analysis Project Name Prefix Actinotignum urinale UMB0759
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 201402
Completion Status Complete
IMG Completion Date 2018-11-02
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 1.2
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 17
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1530
Estimated Size 1791275
Sequencing Depth (MIGS-31.1) 150.26x
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By JGI automated process on 2018-10-20
Last Modified By JGI automated process on 2018-11-13
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2806310668
Genbank Accession
Genbank ID PNHX00000000 (GCA_002872015.1)
Release Date 2018-01-13
NCBI Genbank Version PNHX01
Assembly Accession GCA_002872015.1
Genbank Release Date 2018-01-13
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of female urinary tract bacteria isolated using an Enhanced Quantitative Urine Culture (EQUC) protocol
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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