ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0314795
Analysis Project Name Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 211149
Completion Status Complete
IMG Completion Date 2019-11-11
PI Paul Dijkstra
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 1.1.2
Scaffold Count 533046
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 610256
Estimated Size 259146587
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.1
Added By JGI automated process on 2018-09-28
Last Modified By JGI automated process on 2022-06-18
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300034670
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1206019 (Portal)
ITS Analysis Project Name C8R4 metaT Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1
Library Names GHNZW
JGI Award DOI