ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0314786
Analysis Project Name Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 211140
Completion Status Complete
IMG Completion Date 2019-11-16
PI Paul Dijkstra
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 1.1.2
Scaffold Count 705195
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 792202
Estimated Size 337051061
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.1
Added By JGI automated process on 2018-09-28
Last Modified By JGI automated process on 2022-06-18
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300034664
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1205992 (Portal)
ITS Analysis Project Name T20R3 metaT Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60000955

 

 

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