ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0310831
Analysis Project Name Sorghum-adapted microbial communities enriched on wild type (WT) sorghum from Joint BioEnergy Institute, Emeryville, California, United States - WT_Day14_8
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 201307
Completion Status Complete
IMG Completion Date 2018-10-31
PI Steven W. Singer
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.12.0
Scaffold Count 74798
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 165886
Estimated Size 115899259
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By JGI automated process on 2018-08-25
Last Modified By JGI automated process on 2022-06-18
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300031180
IMG Metagenome bin count 4
IMG Predicted viruses 5
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
Derived Analysis Projects (DAP) 2
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1204014 (Portal)
ITS Analysis Project Name WT_Day14_8 metagenome
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1
Library Names CWAXW
JGI Award DOI