ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0310824
Analysis Project Name Prefix Sorghum-adapted microbial communities enriched on wild type (WT) sorghum from Joint BioEnergy Institute, Emeryville, California, United States - WT_Day14_1
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 209642
Completion Status Complete
IMG Completion Date 2019-11-14
PI Steven W. Singer
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
Scaffold Count 77398
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 160488
Estimated Size 106567997
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.0
Added By JGI automated process on 2018-08-25
Last Modified By JGI automated process on 2021-10-11
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300033951
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1204000 (Portal)
ITS Analysis Project Name WT_Day14_1 metagenome
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1

 

 

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