ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0308454
Analysis Project Name Prefix Coxiella endosymbiont of Rhipicephalus microplus CLE-RmD
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 194938
Completion Status Complete
IMG Completion Date 2018-08-24
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.10.1; Velvet v. 1.2.10; CLCGenomics Workbench v. 9.5.2; CISA v. 1.3
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 79
Contig Count 89
Gene Calling Method (MIGS-32)
Gene Count 794
Estimated Size 1288858
Sequencing Depth (MIGS-31.1) 232.0x
Annotation Pipeline IMG Annotation Pipeline v.4.16.4
Added By JGI automated process on 2018-07-16
Last Modified By JGI automated process on 2018-09-09
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2791355061
IMG RNA-Seq ID
Genbank
Genbank ID DLUJ00000000 (GCA_002930125.1)
Release Date 2018-03-22
NCBI Genbank Version DLUJ01
Assembly Accession GCA_002930125.1
Genbank Release Date 2018-03-22
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Coxiella endosymbiont of Rhipicephalus microplus CLE-RmD genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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