ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0308193
Analysis Project Name Metatranscriptome of bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 200979
Completion Status Complete
IMG Completion Date 2018-10-30
PI Eoin Brodie
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 1.1.2
Scaffold Count 343919
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 381808
Estimated Size 165285675
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By JGI automated process on 2018-07-13
Last Modified By JGI automated process on 2022-06-18
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300031096
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Bulk soil microbial communities from the East River watershed near Crested Butte, Colorado, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1203860 (Portal)
ITS Analysis Project Name ER_RNA_194 Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1
JGI Award DOI 10.46936/fics.proj.2017.49991/60006232

 

 

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