ANALYSIS PROJECT INFORMATION | |||||||||||||||||||
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GOLD Analysis Project ID
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Ga0272034 |
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Analysis Project Name Prefix |
Shigella boydii ATCC 8700 |
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Analysis Project Name Suffix
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Analysis Project Type
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Genome Analysis |
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IMG Submission ID
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Completion Status |
Incomplete |
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IMG Completion Date
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PI | |||||||||||||||||||
Description
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Submitting a public genome from NCBI/GenBank to IMG for analysis. |
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Visibility | Public | ||||||||||||||||||
ANALYSIS PROJECT METADATA | |||||||||||||||||||
Assembly Method
(MIGS-30)
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HGAP v. 3 |
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IMG Decontamination
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No |
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IMG Decontamination Method
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GenePRIMP |
No |
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Scaffold Count
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Contig Count
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3 |
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Gene Calling Method
(MIGS-32)
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Gene Count |
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Estimated Size |
4530000 |
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Sequencing Depth
(MIGS-31.1)
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36.0x |
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Annotation Pipeline |
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Added By |
JGI automated process
on 2018-04-30 |
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Last Modified By | |||||||||||||||||||
Non-SP-Owner AP |
No |
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PROJECT EXTERNAL REFERENCES | |||||||||||||||||||
IMG Taxon ID
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IMG RNA-Seq ID |
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Genbank
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Assembly Accession |
GCA_002946735.1 |
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Genbank Release Date |
2018-02-23 |
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SRA Runs |
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ANALYSIS PROJECT COMPOSITION | |||||||||||||||||||
Study |
Genome Sequences of Shiga Toxin-Producing Escherichia coli Isolates |
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Number of Studies
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1 |
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Number of Projects
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1 |
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Number of Related Analysis Projects
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0 |
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Derived Analysis Projects
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0 |
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