ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0272034
Analysis Project Name Prefix Shigella boydii ATCC 8700
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 226296
Completion Status Complete
IMG Completion Date 2020-01-09
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. 3
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 3
Contig Count 3
Gene Calling Method (MIGS-32)
Gene Count 5529
Estimated Size 4525323
Sequencing Depth (MIGS-31.1) 36.0x
Annotation Pipeline IMG Annotation Pipeline v.5.0.9
Added By JGI automated process on 2018-04-30
Last Modified By JGI automated process on 2020-01-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2850761752
IMG RNA-Seq ID
Genbank Accession
Genbank ID CP026731 (GCA_002946735.1)
Release Date 2018-02-23
NCBI Genbank Version CP026731.1
Genbank ID CP026733 (GCA_002946735.1)
Release Date 2018-02-23
NCBI Genbank Version CP026733.1
Genbank ID CP026732 (GCA_002946735.1)
Release Date 2018-02-23
NCBI Genbank Version CP026732.1
Assembly Accession GCA_002946735.1
Genbank Release Date 2018-02-23
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome Sequences of Shiga Toxin-Producing Escherichia coli Isolates
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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