ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0227266
Analysis Project Name Prefix Marinobacter hydrocarbonoclasticus 114E
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 178492
Completion Status Complete
Completion Date 2018-02-21
PI Regina Lamendella
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 32
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4070
Estimated Size 4296828
Sequencing Depth (MIGS-31.1) 334x
Annotation Pipeline IMG Annotation Pipeline v.4.16.0
Added By JGI automated process on 2017-11-14
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2770939454
IMG RNA-Seq ID
Genbank
Genbank ID QPJB00000000
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater and sediment microbial communities from various areas in North America, analyzing microbe dynamics in response to fracking
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1173649 (Portal)
ITS Analysis Project Name Marinobacter hydrocarbonoclasticus 114E
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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