ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0214290 |
Analysis Project Name |
Sorted cell/s from the Olkiluoto Island deep subsurface site groundwater, Finland - uncultured microorganism JGI SbSrfc.KR11.SmLR.04.J8 |
Analysis Project Name Suffix
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Analysis Project Type
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Metagenome - Single Particle Sort |
IMG Submission ID
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163729 |
Completion Status |
Complete |
IMG Completion Date
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2017-11-15 |
PI | Mark Dopson |
Analysis Project Description
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|
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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spades v. 3.10.1 |
Scaffold Count
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46 |
Contig Count
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|
Gene Calling Method
(MIGS-32)
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|
Gene Count |
222 |
Estimated Size |
182609 |
Sequencing Depth
(MIGS-31.1)
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Genbank Anomalous Assembly |
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Genbank Anomalous Reason |
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Annotation Pipeline |
IMG Annotation Pipeline v.4.15.2 |
Added By |
JGI automated process
on 2017-09-21 |
Last Modified By |
JGI automated process
on 2022-06-18 |
ORF Comparison Tools
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300021664 |
Genbank Accession
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Genbank Release Date |
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SRA Runs |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Groundwater microbial communities from three deep subsurface sites in Europe |
Number of Studies
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1 |
Number of Biosamples
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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0 |
Derived Analysis Projects (DAP)
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0 |
JGI INFORMATION | |
JGI Data Utilization Status
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Unrestricted |
ITS Analysis Project ID
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1153728 (Portal) |
ITS Analysis Project Name
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uncultured microorganism JGI SbSrfc.KR11.SmLR.04.J8 |
ITS Analysis Product Name
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Single Particle Sort, 16S Negative, Unscreened |
ITS Version Number |
1 |
JGI Award DOI
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10.46936/10.25585/60000833 |
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