ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0209947
Analysis Project Name Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_B_D2_MG (SPAdes)
Analysis Project Name Stem Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_B_D2_MG
Analysis Project Name Suffix (SPAdes)
Analysis Project Type Metagenome Analysis
IMG Submission ID 185706
Completion Status Complete
IMG Completion Date 2018-04-17
PI Susannah Tringe
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.11.1
Scaffold Count 812557
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1188274
Estimated Size 607470149
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.16.2
Added By JGI automated process on 2017-08-13
Last Modified By JGI automated process on 2022-06-18
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300026251
IMG Metagenome bin count 15
IMG Predicted viruses 17
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Salt pond water, soil and salt crust microbial communities from South San Francisco under conditions of wetland restoration.
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 1
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1166463 (Portal)
ITS Analysis Project Name Salt Pond MetaG R2_B_D2_MG (SPAdes)
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 2
JGI Award DOI 10.46936/10.25585/60000820

 

 

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