ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0209810
Analysis Project Name Prefix Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1
Analysis Project Name Suffix (SPAdes)
Analysis Project Type Metagenome Analysis
IMG Submission ID 187159
Completion Status Complete
IMG Completion Date 2018-05-12
PI Ashley Shade
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.11.1
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 963141
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1607210
Estimated Size 922194601
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.2
Added By JGI automated process on 2017-08-13
Last Modified By JGI automated process on 2019-05-06
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300027773
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire.
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1166326 (Portal)
ITS Analysis Project Name Coalmine Soil_Cen14_06102014_R1 (SPAdes)
ITS Analysis Product Name Metagenome Standard Draft
ITS NCBI Taxon ID
ITS Version Number 2

 

 

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