ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0206162
Analysis Project Name Prefix Sorted cell/s from the Aspo Hard Rock Laboratory (HRL) deep subsurface site groundwater, Oskarshamn, Sweden - uncultured microorganism SbSrfc.KA33.01.F21
Analysis Project Name Suffix
Analysis Project Type Metagenome - Single Particle Sort
IMG Submission ID 164028
Completion Status Complete
IMG Completion Date 2017-11-16
PI Mark Dopson
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
Scaffold Count 200
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3692
Estimated Size 3604253
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.15.2
Added By JGI automated process on 2017-07-24
Last Modified By JGI automated process on 2020-12-05
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300021840
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Groundwater microbial communities from three deep subsurface sites in Europe
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1151152 (Portal)
ITS Analysis Project Name uncultured microorganism SbSrfc.KA33.01.F21
ITS Analysis Product Name Single Particle Sort, 16S Negative, Unscreened
ITS Version Number 1

 

 

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